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Tempo-Spatial Compressed Sensing of Organ-on-a-Chip for Pervasive Health

  • SUNY Buffalo
  • University of Colorado Denver
  • Chang'an University

Research output: Contribution to journalArticlepeer-review

2 Scopus citations

Abstract

As a micro-engineered biomimeticsystem to replicate key functions of living organs, organ-on-a-chip (OC) technology provides a high-throughput model for investigating complex cell interactions with both high temporal and spatial resolutions in biological studies. Typically, microscopy and high-speed video cameras are used for data acquisition, which are expensive and bulky. Recently, compressed sensing (CS) has increasingly attracted attentions due to its extremely low-complexity structure and low sampling rate. However, there is no CS solution tailored for tempo-spatial information acquisition. In this paper, we propose tempo-spatial CS (TS-CS), a unified CS architecture for OC stream, which achieves significant cost reduction and truly combines sensing with compression along the temporal and spatial domains. We point out that TS-CS can consistently achieve better performance by exploiting tempo-spatial compressibility in OC data. To this end, we comprehensively evaluate the system performance by employing four different bases for CS. With comparison to the traditional way, we show that TS-CS always obtains better recovery result with a throughput bound and can achieve around 25% throughput improvement under a reconstruction demand by applying discrete cosine transform matrix as the basis.

Original languageEnglish
Pages (from-to)325-334
Number of pages10
JournalIEEE Journal of Biomedical and Health Informatics
Volume22
Issue number2
DOIs
StatePublished - Mar 2018

Keywords

  • Compressed sensing
  • organ-on-a-chip
  • pervasive health
  • tempo-spatial information acquisition

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