Protein-centric connection of biomedical knowledge: Protein ontology (pro) research and annotation tools

Cecilia N. Arighi; Darren A. Natale; Judith A. Blake; Carol J. Bult; Michael Caudy; Alexander D. Diehl; Harold J. Drabkin; Peter D'Eustachio; Alexei Evsikov; Hongzhan Huang; Natalia V. Roberts; Alan Ruttenberg; Barry Smith; Jian Zhang; Cathy H. Wu

Protein-centric connection of biomedical knowledge: Protein ontology (pro) research and annotation tools

Cecilia N. Arighi
, Darren A. Natale
, Judith A. Blake
, Carol J. Bult
, Michael Caudy
, Alexander D. Diehl
, Harold J. Drabkin
, Peter D'Eustachio
, Alexei Evsikov
, Hongzhan Huang
, Natalia V. Roberts
, Alan Ruttenberg
, Barry Smith
, Jian Zhang
, Cathy H. Wu

University of Delaware
Georgetown University
Jackson Laboratory
Ontario Institute for Cancer Research
New York University
SUNY Buffalo

Research output: Contribution to journal › Conference article › peer-review

Abstract

The Protein Ontology (PRO) web resource provides an integrative framework for protein-centric exploration and enables specific and precise annotation of proteins and protein complexes based on PRO. Functionalities include: browsing, searching and retrieving, terms, displaying selected terms in OBO or OWL format, and supporting URIs. In addition, the PRO website offers multiple ways for the user to request, submit, or modify terms and/or annotation. We will demonstrate the use of these tools for protein research and annotation.

Original language	English
Pages (from-to)	285-287
Number of pages	3
Journal	CEUR Workshop Proceedings
Volume	833
State	Published - 2011
Event	2nd International Conference on Biomedical Ontology, ICBO 2011 - Buffalo, NY, United States Duration: Jul 26 2011 → Jul 30 2011

Cite this

@article{d62ab168092b4b2881f0f47593440158,

title = "Protein-centric connection of biomedical knowledge: Protein ontology (pro) research and annotation tools",

abstract = "The Protein Ontology (PRO) web resource provides an integrative framework for protein-centric exploration and enables specific and precise annotation of proteins and protein complexes based on PRO. Functionalities include: browsing, searching and retrieving, terms, displaying selected terms in OBO or OWL format, and supporting URIs. In addition, the PRO website offers multiple ways for the user to request, submit, or modify terms and/or annotation. We will demonstrate the use of these tools for protein research and annotation.",

author = "Arighi, \{Cecilia N.\} and Natale, \{Darren A.\} and Blake, \{Judith A.\} and Bult, \{Carol J.\} and Michael Caudy and Diehl, \{Alexander D.\} and Drabkin, \{Harold J.\} and Peter D'Eustachio and Alexei Evsikov and Hongzhan Huang and Roberts, \{Natalia V.\} and Alan Ruttenberg and Barry Smith and Jian Zhang and Wu, \{Cathy H.\}",

year = "2011",

language = "English",

volume = "833",

pages = "285--287",

journal = "CEUR Workshop Proceedings",

issn = "1613-0073",

publisher = "CEUR-WS",

note = "2nd International Conference on Biomedical Ontology, ICBO 2011 ; Conference date: 26-07-2011 Through 30-07-2011",

}

TY - JOUR

T1 - Protein-centric connection of biomedical knowledge

T2 - 2nd International Conference on Biomedical Ontology, ICBO 2011

AU - Arighi, Cecilia N.

AU - Natale, Darren A.

AU - Blake, Judith A.

AU - Bult, Carol J.

AU - Caudy, Michael

AU - Diehl, Alexander D.

AU - Drabkin, Harold J.

AU - D'Eustachio, Peter

AU - Evsikov, Alexei

AU - Huang, Hongzhan

AU - Roberts, Natalia V.

AU - Ruttenberg, Alan

AU - Smith, Barry

AU - Zhang, Jian

AU - Wu, Cathy H.

PY - 2011

Y1 - 2011

N2 - The Protein Ontology (PRO) web resource provides an integrative framework for protein-centric exploration and enables specific and precise annotation of proteins and protein complexes based on PRO. Functionalities include: browsing, searching and retrieving, terms, displaying selected terms in OBO or OWL format, and supporting URIs. In addition, the PRO website offers multiple ways for the user to request, submit, or modify terms and/or annotation. We will demonstrate the use of these tools for protein research and annotation.

AB - The Protein Ontology (PRO) web resource provides an integrative framework for protein-centric exploration and enables specific and precise annotation of proteins and protein complexes based on PRO. Functionalities include: browsing, searching and retrieving, terms, displaying selected terms in OBO or OWL format, and supporting URIs. In addition, the PRO website offers multiple ways for the user to request, submit, or modify terms and/or annotation. We will demonstrate the use of these tools for protein research and annotation.

UR - https://www.scopus.com/pages/publications/84891942897

M3 - Conference article

AN - SCOPUS:84891942897

SN - 1613-0073

VL - 833

SP - 285

EP - 287

JO - CEUR Workshop Proceedings

JF - CEUR Workshop Proceedings

Y2 - 26 July 2011 through 30 July 2011

ER -

Protein-centric connection of biomedical knowledge: Protein ontology (pro) research and annotation tools

Abstract

Other files and links

Fingerprint

Cite this