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Novel projected 4D triple resonance experiments for polypeptide backbone chemical shift assignment

  • University of Toronto

Research output: Contribution to journalArticlepeer-review

17 Scopus citations

Abstract

Here we present a novel suite of projected 4D triple-resonance NMR experiments for efficient sequential assignment of polypeptide backbone chemical shifts in 13C/15N doubly labeled proteins. In the 3D HNN[CAHA] and 3D 14NN(CO)[CAHA] experiments, the 13Cα and 1Hα chemical shifts evolve in a common dimension and are simultaneously detected in quadrature. These experiments are particularly useful for the assignment of glycine-rich polypeptide segments. Appropriate setting of the 1H radiofrequency carrier allows one to place cross peaks correlating either backbone 15N/1HN/13Cα or 15N/1HN/1Hα, chemical shifts in separate spectral regions. Hence, peak overlap is not increased when compared with the conventional 3D HNNCA and HNN(CA)HA. 3D HNN[CAHA] and 3D HNN(CO)[CAHA] are complemented by 3D reduced-dimensionality (RD) HNN COCA and HNN CACO, where 13Cα and 13C chemical shifts evolve in a common dimension. The 13Cα shift is detected in quadrature, which yields peak pairs encoding the 13C chemical shift in an in-phase splitting. This suite of four experiments promises to be of value for automated high-throughput NMR structure determination in structural genomics, where the requirement to independently sample many indirect dimensions in a large number of NMR experiments may prevent one from accurately adjusting NMR measurement times to spectrometer sensitivity.

Original languageEnglish
Pages (from-to)41-50
Number of pages10
JournalJournal of Biomolecular NMR
Volume24
Issue number1
DOIs
StatePublished - Sep 1 2002

Keywords

  • Automated protein NMR assignment
  • Protein structure
  • Reduced-dimensionality triple-resonance experiments
  • Resolution enhancement
  • Structural genomics

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