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Hacking the Immune Response to Infection in Chronic Obstructive Pulmonary Disease

  • Rochester General Hospital

Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

2 Scopus citations

Abstract

Efforts to treat chronic diseases are often obstructed by the complexity of the biological mechanisms supporting pathology. Here, we apply a novel method for discrete logical modeling of biological systems to the problem of infectious exacerbations in chronic obstructive pulmonary disease (COPD), using data from human clinical studies to constrain the selection of decisional logic parameters. We obtained two candidate models satisfactorily adhering to the available data. A predicted resting state with no activation of inflammatory markers was supported natively in one model, and could be induced following onset of an exacerbation episode in either model by applying targeted suppression of IL-4 concurrently with at least one additional inflammatory marker including IL-IB. Recapitulating a failed clinical trial of anakinra, suppression of IL-IB alone was not predicted to be sufficient. Instead, these results suggest that the efficacy of IL-IB suppression in the treatment of COPD might be improved by the added concurrent suppression of IL-4 and CCL4 or IL-4 and IL-17A.

Original languageEnglish
Title of host publicationProceedings - IEEE 20th International Conference on Bioinformatics and Bioengineering, BIBE 2020
PublisherInstitute of Electrical and Electronics Engineers Inc.
Pages548-555
Number of pages8
ISBN (Electronic)9781728195742
DOIs
StatePublished - Oct 2020
Event20th IEEE International Conference on Bioinformatics and Bioengineering, BIBE 2020 - Virtual, Cincinnati, United States
Duration: Oct 26 2020Oct 28 2020

Publication series

NameProceedings - IEEE 20th International Conference on Bioinformatics and Bioengineering, BIBE 2020

Conference

Conference20th IEEE International Conference on Bioinformatics and Bioengineering, BIBE 2020
Country/TerritoryUnited States
CityVirtual, Cincinnati
Period10/26/2010/28/20

Keywords

  • COPD
  • discrete simulation
  • drug selection
  • regulatory logic
  • target prediction

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