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Genome-wide association studies of human and rat BMI converge on synapse, epigenome, and hormone signaling networks

  • Sarah N. Wright
  • , Brittany S. Leger
  • , Sara Brin Rosenthal
  • , Sophie N. Liu
  • , Tongqiu Jia
  • , Apurva S. Chitre
  • , Oksana Polesskaya
  • , Katie Holl
  • , Jianjun Gao
  • , Riyan Cheng
  • , Angel Garcia Martinez
  • , Anthony George
  • , Alexander F. Gileta
  • , Wenyan Han
  • , Alesa H. Netzley
  • , Christopher P. King
  • , Alexander Lamparelli
  • , Connor Martin
  • , Celine L. St. Pierre
  • , Tengfei Wang
  • Hannah Bimschleger, Jerry Richards, Keita Ishiwari, Hao Chen, Shelly B. Flagel, Paul Meyer, Terry E. Robinson, Leah C. Solberg Woods, Jason F. Kreisberg, Trey Ideker, Abraham A. Palmer
  • University of California at San Diego
  • Medical College of Wisconsin
  • University of Tennessee Health Science Center
  • SUNY Buffalo
  • The University of Chicago
  • University of Michigan, Ann Arbor
  • Washington University St. Louis
  • Wake Forest University

Research output: Contribution to journalArticlepeer-review

12 Scopus citations

Abstract

A vexing observation in genome-wide association studies (GWASs) is that parallel analyses in different species may not identify orthologous genes. Here, we demonstrate that cross-species translation of GWASs can be greatly improved by an analysis of co-localization within molecular networks. Using body mass index (BMI) as an example, we show that the genes associated with BMI in humans lack significant agreement with those identified in rats. However, the networks interconnecting these genes show substantial overlap, highlighting common mechanisms including synaptic signaling, epigenetic modification, and hormonal regulation. Genetic perturbations within these networks cause abnormal BMI phenotypes in mice, too, supporting their broad conservation across mammals. Other mechanisms appear species specific, including carbohydrate biosynthesis (humans) and glycerolipid metabolism (rodents). Finally, network co-localization also identifies cross-species convergence for height/body length. This study advances a general paradigm for determining whether and how phenotypes measured in model species recapitulate human biology.

Original languageEnglish
Article number112873
JournalCell Reports
Volume42
Issue number8
DOIs
StatePublished - Aug 29 2023

Keywords

  • BMI
  • CP: Genomics
  • GWAS
  • body mass index
  • cross-species
  • gene networks
  • genome-wide association studies
  • heterogeneous stock rat
  • network
  • network co-localization
  • rat

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