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Diversity is key for cross-ancestry transferability of glaucoma genetic risk scores in Hispanic Veterans in the Million Veteran Program

  • Andrea R. Waksmunski
  • , Tyler G. Kinzy
  • , Lauren A. Cruz
  • , Cari L. Nealon
  • , Christopher W. Halladay
  • , Scott A. Anthony
  • , Paul B. Greenberg
  • , Jack M. Sullivan
  • , Wen Chih Wu
  • , Sudha K. Iyengar
  • , Dana C. Crawford
  • , Neal S. Peachey
  • , Jessica N. Cooke Bailey
  • Case Western Reserve University
  • VA Northeast Ohio Healthcare System
  • V.A. Medical Center
  • Brown University
  • Cleveland Clinic Foundation
  • Cleveland Clinic Lerner College of Medicine of Case Western Reserve University

Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

2 Scopus citations

Abstract

A major goal of precision medicine is to stratify patients based on their genetic risk for a disease to inform future screening and intervention strategies. For conditions like primary open-angle glaucoma (POAG), the genetic risk architecture is complicated with multiple variants contributing small effects on risk. Following the tepid success of genome-wide association studies for high-effect disease risk variant discovery, genetic risk scores (GRS), which collate effects from multiple genetic variants into a single measure, have shown promise for disease risk stratification. We assessed the application of GRS for POAG risk stratification in Hispanic-descent (HIS) and European-descent (EUR) Veterans in the Million Veteran Program. Unweighted and cross-ancestry meta-weighted GRS were calculated based on 127 genomic variants identified in the most recent report of cross-ancestry POAG meta-analyses. We found that both GRS types were associated with POAG case-control status and performed similarly in HIS and EUR Veterans. This trend was also seen in our subset analysis of HIS Veterans with less than 50% EUR global genetic ancestry. Our findings highlight the importance of evaluating GRS based on known POAG risk variants in different ancestry groups and emphasize the need for more multi-ancestry POAG genetic studies.

Original languageEnglish
Title of host publicationPacific Symposium on Biocomputing, PSB 2023
EditorsRuss B. Altman, Lawrence Hunter, Marylyn D. Ritchie, Tiffany Murray, Teri E. Klein
PublisherWorld Scientific
Pages413-424
Number of pages12
Edition2023
ISBN (Electronic)9789811270604
DOIs
StatePublished - 2023
Event28th Pacific Symposium on Biocomputing, PSB 2023 - Kohala Coast, United States
Duration: Jan 3 2023Jan 7 2023

Conference

Conference28th Pacific Symposium on Biocomputing, PSB 2023
Country/TerritoryUnited States
CityKohala Coast
Period01/3/2301/7/23

Keywords

  • ancestral diversity
  • Genetic risk score
  • primary open-angle glaucoma

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