Abstract
A major goal of precision medicine is to stratify patients based on their genetic risk for a disease to inform future screening and intervention strategies. For conditions like primary open-angle glaucoma (POAG), the genetic risk architecture is complicated with multiple variants contributing small effects on risk. Following the tepid success of genome-wide association studies for high-effect disease risk variant discovery, genetic risk scores (GRS), which collate effects from multiple genetic variants into a single measure, have shown promise for disease risk stratification. We assessed the application of GRS for POAG risk stratification in Hispanic-descent (HIS) and European-descent (EUR) Veterans in the Million Veteran Program. Unweighted and cross-ancestry meta-weighted GRS were calculated based on 127 genomic variants identified in the most recent report of cross-ancestry POAG meta-analyses. We found that both GRS types were associated with POAG case-control status and performed similarly in HIS and EUR Veterans. This trend was also seen in our subset analysis of HIS Veterans with less than 50% EUR global genetic ancestry. Our findings highlight the importance of evaluating GRS based on known POAG risk variants in different ancestry groups and emphasize the need for more multi-ancestry POAG genetic studies.
| Original language | English |
|---|---|
| Title of host publication | Pacific Symposium on Biocomputing, PSB 2023 |
| Editors | Russ B. Altman, Lawrence Hunter, Marylyn D. Ritchie, Tiffany Murray, Teri E. Klein |
| Publisher | World Scientific |
| Pages | 413-424 |
| Number of pages | 12 |
| Edition | 2023 |
| ISBN (Electronic) | 9789811270604 |
| DOIs | |
| State | Published - 2023 |
| Event | 28th Pacific Symposium on Biocomputing, PSB 2023 - Kohala Coast, United States Duration: Jan 3 2023 → Jan 7 2023 |
Conference
| Conference | 28th Pacific Symposium on Biocomputing, PSB 2023 |
|---|---|
| Country/Territory | United States |
| City | Kohala Coast |
| Period | 01/3/23 → 01/7/23 |
Keywords
- ancestral diversity
- Genetic risk score
- primary open-angle glaucoma
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