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Context-Specific Feature Augmentation for Improving Social Determinants of Health Extraction

  • University of Virginia
  • Purdue University
  • University of Iowa

Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

2 Scopus citations

Abstract

Social determinants of health (SDoH) factors such as poverty, social environment, and unemployment are known to profoundly impact health outcomes. However, extracting SDoH from the electronic health records (EHR) is a challenge due to the unstructured nature of clinical narratives that encode them. To address this, several approaches ranging from rule-based natural language processing to large language models have been proposed in the literature. Despite significant advances, the existing SDoH extraction approaches are not robust to the noise present in clinical notes or discharge summaries and thus yield unsatisfactory performance. In other words, the noisy information in clinical notes leads to the generation of low-quality feature representations of medical concepts that severely impacts the performance of SDoH extraction.In this paper, we propose a novel approach that augments EHR discharge summaries with context-specific semantic knowledge from biomedical literature to generate robust feature representations needed for accurate SDoH extraction. Specifically, our approach identifies key contextual information (e.g., symptoms, diseases, and medications) from EHR discharge summaries and retrieves relevant scientific articles to generate additional semantic context for SDoH classifier. Moreover, to effectively fuse complementary information from both EHR discharge summaries and biomedical literature, we propose a new feature infusion strategy that adaptively fuses feature representations based on their contextual relevance. Experimental results on the benchmark MIMIC-SDoH dataset demonstrate that the proposed approach significantly outperforms baseline algorithms and highlight the role of context-specific feature augmentation in enhancing the accuracy of SDoH extraction.

Original languageEnglish
Title of host publicationProceedings - 2024 IEEE International Conference on Big Data, BigData 2024
EditorsWei Ding, Chang-Tien Lu, Fusheng Wang, Liping Di, Kesheng Wu, Jun Huan, Raghu Nambiar, Jundong Li, Filip Ilievski, Ricardo Baeza-Yates, Xiaohua Hu
PublisherInstitute of Electrical and Electronics Engineers Inc.
Pages1736-1745
Number of pages10
ISBN (Electronic)9798350362480
DOIs
StatePublished - 2024
Event2024 IEEE International Conference on Big Data, BigData 2024 - Washington, United States
Duration: Dec 15 2024Dec 18 2024

Publication series

NameProceedings - 2024 IEEE International Conference on Big Data, BigData 2024
ISSN (Print)2639-1589
ISSN (Electronic)2573-2978

Conference

Conference2024 IEEE International Conference on Big Data, BigData 2024
Country/TerritoryUnited States
CityWashington
Period12/15/2412/18/24

Keywords

  • electronic health records
  • feature augmentation
  • social determinants of health

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