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Bio-SCOPE: fast biexponential T mapping of the brain using signal-compensated low-rank plus sparse matrix decomposition

  • Yanjie Zhu
  • , Yuanyuan Liu
  • , Leslie Ying
  • , Xin Liu
  • , Hairong Zheng
  • , Dong Liang
  • Shenzhen Institute of Advanced Technology
  • University of Chinese Academy of Sciences

Research output: Contribution to journalArticlepeer-review

17 Scopus citations

Abstract

Purpose: To develop and evaluate a fast imaging method based on signal-compensated low-rank plus sparse matrix decomposition to accelerate data acquisition for biexponential brain T mapping (Bio-SCOPE). Methods: Two novel strategies were proposed to improve reconstruction performance. A variable-rate undersampling scheme was used with a varied acceleration factor for each k-space along the spin-lock time direction, and a modified nonlinear thresholding scheme combined with a feature descriptor was used for Bio-SCOPE reconstruction. In vivo brain T mappings were acquired from 4 volunteers. The fully sampled k-space data acquired from 3 volunteers were retrospectively undersampled by net acceleration rates (R) of 4.6 and 6.1. Reference values were obtained from the fully sampled data. The agreement between the accelerated T measurements and reference values was assessed with Bland-Altman analyses. Prospectively undersampled data with R = 4.6 and R = 6.1 were acquired from 1 volunteer. Results: T-weighted images were successfully reconstructed using Bio-SCOPE for R = 4.6 and 6.1 with signal-to-noise ratio variations <1 dB and normalized root mean square errors <4%. Accelerated and reference T measurements were in good agreement for R = 4.6 (T s: 18.6651 ± 1.7786 ms; T l: 88.9603 ± 1.7331 ms) and R = 6.1 (T s: 17.8403 ± 3.3302 ms; T l: 88.0275 ± 4.9606 ms) in the Bland-Altman analyses. T parameter maps from prospectively undersampled data also show reasonable image quality using the Bio-SCOPE method. Conclusion: Bio-SCOPE achieves a high net acceleration rate for biexponential T mapping and improves reconstruction quality by using a variable-rate undersampling data acquisition scheme and a modified soft-thresholding algorithm in image reconstruction.

Original languageEnglish
Pages (from-to)2092-2106
Number of pages15
JournalMagnetic Resonance in Medicine
Volume83
Issue number6
DOIs
StatePublished - Jun 1 2020

Keywords

  • biexponential brain T mapping
  • compressed sensing
  • low rank
  • signal compensation

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