TY - GEN
T1 - Ancient angiosperm hexaploidy meets ancestral eudicot gene order
AU - Zheng, Chunfang
AU - Albert, Victor A.
AU - Lyons, Eric
AU - Sankoff, David
PY - 2012
Y1 - 2012
N2 - We propose a protocol for reconstructing and analyzing the post-polyploidization ancestor of a set of genomes. Our method, applied to the post-hexaploid ancestor of six core eudicot flowering plants, reconstructs ancestral gene order, based on orthologs obtained for each pair of data genomes, harmonized into disjoint ortholog sets for multiple genomes.
AB - We propose a protocol for reconstructing and analyzing the post-polyploidization ancestor of a set of genomes. Our method, applied to the post-hexaploid ancestor of six core eudicot flowering plants, reconstructs ancestral gene order, based on orthologs obtained for each pair of data genomes, harmonized into disjoint ortholog sets for multiple genomes.
KW - comparative genomics
KW - genome rearrangement
KW - phylogeny
KW - plant genomes
UR - https://www.scopus.com/pages/publications/84860502645
U2 - 10.1109/ICCABS.2012.6182649
DO - 10.1109/ICCABS.2012.6182649
M3 - Conference contribution
AN - SCOPUS:84860502645
SN - 9781467313216
T3 - 2012 IEEE 2nd International Conference on Computational Advances in Bio and Medical Sciences, ICCABS 2012
BT - 2012 IEEE 2nd International Conference on Computational Advances in Bio and Medical Sciences, ICCABS 2012
T2 - 2012 IEEE 2nd International Conference on Computational Advances in Bio and Medical Sciences, ICCABS 2012
Y2 - 23 February 2012 through 25 February 2012
ER -