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A new class of flexible link functions with application to species co-occurrence in Cape Floristic Region

  • Xun Jiang
  • , Dipak K. Dey
  • , Rachel Prunier
  • , Adam M. Wilson
  • , Kent E. Holsinger
  • University of Connecticut
  • Western Connecticut State University

Research output: Contribution to journalArticlepeer-review

37 Scopus citations

Abstract

Understanding the mechanisms that allow biological species to co-occur is of great interest to ecologists. Here we investigate the factors that influence co-occurrence of members of the genus Protea in the Cape Floristic Region of southwestern Africa, a global hot spot of biodiversity. Due to the binomial nature of our response, a critical issue is to choose appropriate link functions for the regression model. In this paper we propose a new family of flexible link functions for modeling binomial response data. By introducing a power parameter into the cumulative distribution function (c.d.f.) corresponding to a symmetric link function and its mirror reflection, greater flexibility in skewness can be achieved in both positive and negative directions. Through simulated data sets and analysis of the Protea co-occurrence data, we show that the proposed link function is quite flexible and performs better against link misspecification than standard link functions.

Original languageEnglish
Pages (from-to)2180-2204
Number of pages25
JournalAnnals of Applied Statistics
Volume7
Issue number4
DOIs
StatePublished - 2013

Keywords

  • Bayesian method
  • Community ecology
  • Generalized linear model
  • MCMC
  • Model selection
  • Symmetric power link function

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