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Dive into the research topics where Marc Halfon is active. These topic labels come from the works of this person. Together they form a unique fingerprint.
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Collaborations and top research areas from the last five years
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Software tools for enhancer discovery
Halfon, M. (PI)
Eunice Kennedy Shriver National Institute of Child Health & Human Dev
02/1/26 → 01/31/28
Project: Research
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Generating better-targeted training data for computational enhancer discovery in vector insects
Halfon, M. (PI)
National Institute of Allergy & Infectious Disease
06/13/24 → 04/30/26
Project: Research
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REDfly: The regulatory sequence resource for Drosophila and other insects
Halfon, M. (PI) & Bruno, A. (CoI)
National Institute of General Medical Sciences
09/20/21 → 07/31/25
Project: Research
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Measuring functional similarity between transcriptional enhancers using deep learning
Halfon, M. (PI)
National Human Genome Research Institute
09/1/21 → 07/31/24
Project: Research
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Tree-hole breeding mosquitoes in Sennar state, eastern Sudan
Ishag, O. S. B., Kafy, H. T., Sulieman, J. E., Mustafa, K. S., Saboon, K. S. E., Halfon, M. S. & Azrag, R. S., May 2026, In: Transactions of the Royal Society of Tropical Medicine and Hygiene. 120, 5, p. 497-503 7 p.Research output: Contribution to journal › Article › peer-review
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EnhancerMatcher: Comparing cell-type-specific enhancer activity of DNA sequences using deep convolutional neural networks and explainable AI
Solis, L. M., Melendez, W. L., Fuke, S. H., Paul, S., Garza, A. B., Garcia, R., Halfon, M. S. & Girgis, H. Z., Dec 1 2025, In: NAR Genomics and Bioinformatics. 7, 4, lqaf151.Research output: Contribution to journal › Article › peer-review
Open Access -
Redundant and Singular Regulatory Elements Underlie the Rapidly Evolving Pigmentation of Drosophila
Brubaker, L. A., Long, H., Pavlus, A., Williams, M. E., Seibert, D. M., Williams, A. V., Halfon, M. S., Rebeiz, M. & Williams, T. M., Sep 1 2025, In: Molecular Biology and Evolution. 42, 9, msaf213.Research output: Contribution to journal › Article › peer-review
Open Access2 Scopus citations -
A new suite of reporter vectors and a novel landing site survey system to study cis-regulatory elements in diverse insect species
Deem, K. D., Halfon, M. S. & Tomoyasu, Y., Dec 2024, In: Scientific Reports. 14, 1, 10078.Research output: Contribution to journal › Article › peer-review
Open Access -
Conserved and novel enhancers in the Aedes aegypti single-minded locus recapitulate embryonic ventral midline gene expression
Schember, I., Reid, W., Sterling-Lentsch, G. & Halfon, M. S., Apr 29 2024, In: PLOS Genetics. 20, 4 April, e1010891.Research output: Contribution to journal › Article › peer-review
Open Access3 Scopus citations